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This orthogroup contains 281 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 281 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12790 | TRANSCRIPTION INITIATION FACTOR IA RRN3 | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| Pfam | PF05327 | RRN3 | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| GO | GO:0001042 Molecular Function | RNA polymerase I core binding | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| GO | GO:0001181 Molecular Function | RNA polymerase I general transcription initiation factor activity | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| GO | GO:0006361 Biological Process | transcription initiation at RNA polymerase I promoter | 240 / 281 | 85.4% | 100.0% of 240 | ≥80% support |
| KEGG | K15216 | RRN3, TIFIA — Transcription machinery | 194 / 281 | 69.0% | 99.5% of 195 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0148.g71.t1 | XP_044183945.1 | RNA polymerase I-specific transcription initiation factor RRN3-like [Acropora millepora] | B2RS91 RNA polymerase I-specific transcription initiation factor RR | JBrowse |
| Acropora microphthalma | amic_s0148.g71.t2 | XP_015762344.1 | PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Acropora digitifera] | B2RS91 RNA polymerase I-specific transcription initiation factor RR | JBrowse |
