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This orthogroup contains 279 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 279 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21597 | THO2 PROTEIN | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| GO | GO:0000347 Cellular Component | THO complex | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| GO | GO:0000445 Cellular Component | THO complex part of transcription export complex | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| GO | GO:0006397 Biological Process | mRNA processing | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 239 / 279 | 85.7% | 100.0% of 239 | ≥80% support |
| Pfam | PF16134 | THOC2_N — THO complex subunit 2 N-terminus | 212 / 279 | 76.0% | 89.1% of 238 | ≥50% support |
| Pfam | PF11262 | Tho2 — Transcription factor/nuclear export subunit protein 2 | 207 / 279 | 74.2% | 87.0% of 238 | ≥50% support |
| Pfam | PF11732 | Thoc2 — Transcription- and export-related complex subunit | 194 / 279 | 69.5% | 81.5% of 238 | ≥50% support |
| KEGG | K12879 | THOC2 — Spliceosome | 160 / 279 | 57.4% | 98.2% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0192.g26.t1 | XP_044176473.1 | THO complex subunit 2-like isoform X1 [Acropora millepora] | B0KWH8 THO complex subunit 2 OS=Callithrix jacchus OX=9483 GN=THOC2 | JBrowse |
