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Support counts the member genes carrying the term. % of genes is that count over all 278 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48036 | SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED | 249 / 278 | 89.6% | 99.6% of 250 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 246 / 278 | 88.5% | 99.2% of 248 | ≥80% support |
| Pfam | PF15519 | RBM39linker — linker between RRM2 and RRM3 domains in RBM39 protein | 240 / 278 | 86.3% | 96.8% of 248 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 250 / 278 | 89.9% | 100.0% of 250 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 249 / 278 | 89.6% | 99.6% of 250 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 249 / 278 | 89.6% | 99.6% of 250 | ≥80% support |
| GO | GO:0006397 Biological Process | mRNA processing | 249 / 278 | 89.6% | 99.6% of 250 | ≥80% support |
| GO | GO:1990446 Molecular Function | U1 snRNP binding | 249 / 278 | 89.6% | 99.6% of 250 | ≥80% support |
| KEGG | K13091 | RBM23_39 — Spliceosome | 245 / 278 | 88.1% | 99.6% of 246 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0002.g418.t1 | XP_029184371.2 | RNA-binding protein 39-like isoform X1 [Acropora millepora] | Q5RC80 RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 | JBrowse |
| Acropora microphthalma | amic_s0002.g418.t2 | XP_029184371.2 | RNA-binding protein 39-like isoform X1 [Acropora millepora] | Q5RC80 RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 | JBrowse |
