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This orthogroup contains 273 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 273 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15245 | SYMPLEKIN-RELATED | 241 / 273 | 88.3% | 100.0% of 241 | ≥80% support |
| GO | GO:0005847 Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | 241 / 273 | 88.3% | 100.0% of 241 | ≥80% support |
| GO | GO:0006378 Biological Process | obsolete mRNA polyadenylation | 241 / 273 | 88.3% | 100.0% of 241 | ≥80% support |
| Pfam | PF12295 | Symplekin_C — Symplekin tight junction protein C terminal | 204 / 273 | 74.7% | 88.7% of 230 | ≥50% support |
| Pfam | PF11935 | SYMPK_PTA1_N — Symplekin/PTA1 N-terminal | 191 / 273 | 70.0% | 83.0% of 230 | ≥50% support |
| KEGG | K06100 | SYMPK — Messenger RNA biogenesis | 181 / 273 | 66.3% | 97.3% of 186 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0088.g71.t1 | XP_044172549.1 | symplekin-like [Acropora millepora] | Q80X82 Symplekin OS=Mus musculus OX=10090 GN=Sympk PE=1 SV=2 | JBrowse |
