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This orthogroup contains 244 genes from 101 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 244 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0005509 Molecular Function | calcium ion binding | 204 / 244 | 83.6% | 100.0% of 204 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 204 / 244 | 83.6% | 100.0% of 204 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 203 / 244 | 83.2% | 99.5% of 204 | ≥80% support |
| PANTHER | PTHR24027 | CADHERIN-23 | 148 / 244 | 60.7% | 73.3% of 202 | ≥50% support |
| Pfam | PF00028 | Cadherin | 195 / 244 | 79.9% | 99.5% of 196 | ≥50% support |
| GO | GO:0007155 Biological Process | cell adhesion | 178 / 244 | 73.0% | 87.3% of 204 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 176 / 244 | 72.1% | 86.3% of 204 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 166 / 244 | 68.0% | 81.4% of 204 | ≥50% support |
| GO | GO:0016342 Cellular Component | catenin complex | 148 / 244 | 60.7% | 72.6% of 204 | ≥50% support |
| GO | GO:0045296 Molecular Function | cadherin binding | 148 / 244 | 60.7% | 72.6% of 204 | ≥50% support |
| GO | GO:0098742 Biological Process | cell-cell adhesion via plasma-membrane adhesion molecules | 148 / 244 | 60.7% | 72.6% of 204 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0014.g184.t1 | XP_044174845.1 | protocadherin Fat 4-like isoform X1 [Acropora millepora] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Acropora microphthalma | amic_s0014.g186.t1 | XP_015775924.1 | PREDICTED: uncharacterized protein LOC107354036 [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s0014.g187.t1 | XP_015775924.1 | PREDICTED: uncharacterized protein LOC107354036 [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s0014.g188.t1 | XP_044174846.1 | protocadherin Fat 4-like isoform X2 [Acropora millepora] | Q5F226 Protocadherin Fat 2 OS=Mus musculus OX=10090 GN=Fat2 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s2619.g2.t1 | XP_044174846.1 | protocadherin Fat 4-like isoform X2 [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
