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This orthogroup contains 235 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 235 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0003723 Molecular Function | RNA binding | 206 / 235 | 87.7% | 100.0% of 206 | ≥80% support |
| PANTHER | PTHR22792 | LUPUS LA PROTEIN-RELATED | 174 / 235 | 74.0% | 96.1% of 181 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 175 / 235 | 74.5% | 85.0% of 206 | ≥50% support |
| Pfam | PF05383 | La | 161 / 235 | 68.5% | 78.2% of 206 | ≥50% support |
| Pfam | PF08777 | RRM_3 — RNA binding motif | 159 / 235 | 67.7% | 77.2% of 206 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 185 / 235 | 78.7% | 89.8% of 206 | ≥50% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 162 / 235 | 68.9% | 78.6% of 206 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 161 / 235 | 68.5% | 78.2% of 206 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 161 / 235 | 68.5% | 78.2% of 206 | ≥50% support |
| KEGG | K15191 | LARP7 — Transcription machinery | 125 / 235 | 53.2% | 97.7% of 128 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0042.g73.t1 | XP_029211360.2 | la-related protein 7-like [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s4354.g1.t1 | XP_029211360.2 | la-related protein 7-like [Acropora millepora] | – | JBrowse |
