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This orthogroup contains 233 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 233 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21689 | LIN-9 | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| Pfam | PF19438 | LIN9_C — LIN9 C-terminal | 194 / 233 | 83.3% | 96.0% of 202 | ≥80% support |
| Pfam | PF06584 | DIRP | 190 / 233 | 81.6% | 94.1% of 202 | ≥80% support |
| GO | GO:0000003 Biological Process | obsolete reproduction | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0017053 Cellular Component | transcription repressor complex | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| GO | GO:0051726 Biological Process | regulation of cell cycle | 202 / 233 | 86.7% | 99.5% of 203 | ≥80% support |
| KEGG | K21773 | LIN9 — Cellular senescence | 168 / 233 | 72.1% | 100.0% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0187.g25.t1 | XP_029185160.2 | protein lin-9 homolog isoform X2 [Acropora millepora] | Q4R8N2 Protein lin-9 homolog OS=Macaca fascicularis OX=9541 GN=LIN9 | JBrowse |
| Acropora microphthalma | amic_s0187.g25.t2 | XP_029185159.2 | protein lin-9 homolog isoform X1 [Acropora millepora] | Q4R8N2 Protein lin-9 homolog OS=Macaca fascicularis OX=9541 GN=LIN9 | JBrowse |
| Acropora microphthalma | amic_s0187.g25.t3 | XP_029185160.2 | protein lin-9 homolog isoform X2 [Acropora millepora] | Q4R8N2 Protein lin-9 homolog OS=Macaca fascicularis OX=9541 GN=LIN9 | JBrowse |
