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This orthogroup contains 230 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 230 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12949 | RNA POLYMERASE III DNA DIRECTED -RELATED | 203 / 230 | 88.3% | 100.0% of 203 | ≥80% support |
| GO | GO:0003697 Molecular Function | single-stranded DNA binding | 203 / 230 | 88.3% | 100.0% of 203 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 203 / 230 | 88.3% | 100.0% of 203 | ≥80% support |
| Pfam | PF05645 | RNA_pol_Rpc82 — RNA polymerase III subunit RPC82 | 177 / 230 | 77.0% | 87.6% of 202 | ≥50% support |
| Pfam | PF20912 | RPC3_helical — DNA-directed RNA polymerase III subunit RPC3, helical hairpin domain | 177 / 230 | 77.0% | 87.6% of 202 | ≥50% support |
| Pfam | PF08221 | HTH_9 — RNA polymerase III subunit RPC82 helix-turn-helix domain | 161 / 230 | 70.0% | 79.7% of 202 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 177 / 230 | 77.0% | 87.2% of 203 | ≥50% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 177 / 230 | 77.0% | 87.2% of 203 | ≥50% support |
| KEGG | K03023 | RPC3, POLR3C — Transcription machinery | 154 / 230 | 67.0% | 98.7% of 156 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0094.g34.t1 | XP_015753993.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Acropora digitifera] | Q9BUI4 DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens | JBrowse |
| Acropora microphthalma | amic_s3635.g1.t1 | XP_029196521.2 | DNA-directed RNA polymerase III subunit RPC3-like [Acropora millepora] | Q2TBL4 DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus O | JBrowse |
