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This orthogroup contains 217 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 217 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22536 | LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN | 180 / 217 | 83.0% | 99.5% of 181 | ≥80% support |
| Pfam | PF10278 | Med19 — Mediator of RNA pol II transcription subunit 19 | 194 / 217 | 89.4% | 100.0% of 194 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 194 / 217 | 89.4% | 100.0% of 194 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 194 / 217 | 89.4% | 100.0% of 194 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 194 / 217 | 89.4% | 100.0% of 194 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 180 / 217 | 83.0% | 92.8% of 194 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 180 / 217 | 83.0% | 92.8% of 194 | ≥80% support |
| KEGG | K15137 | MED19 — Transcription machinery | 145 / 217 | 66.8% | 98.6% of 147 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0057.g22.t1 | XP_029201452.1 | mediator of RNA polymerase II transcription subunit 19-like [Acropora millepora] | Q174D3 Mediator of RNA polymerase II transcription subunit 19 OS=Ae | JBrowse |
