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This orthogroup contains 158 genes from 126 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 158 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15481 | RIBONUCLEIC ACID BINDING PROTEIN S1 | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| GO | GO:0061574 Cellular Component | ASAP complex | 138 / 158 | 87.3% | 100.0% of 138 | ≥80% support |
| KEGG | K14325 | RNPS1 — Messenger RNA biogenesis | 134 / 158 | 84.8% | 100.0% of 134 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0148.g4.t1 | XP_029189753.1 | RNA-binding protein with serine-rich domain 1-like [Acropora millepora] | Q5XG24 RNA-binding protein with serine-rich domain 1-A OS=Xenopus l | JBrowse |
