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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | 19270_t.1 | none | – | JBrowse | |
| Astreopora myriophthalma | 19273_t.1 | none | – | JBrowse | |
| Astreopora myriophthalma | BRAKERYMEP00000010400.1 | XP_020629341.1 | achaete-scute homolog 1b-like [Orbicella faveolata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000010402.1 | XP_015762597.1 | PREDICTED: achaete-scute homolog 3-like [Acropora digitifera] | M0QWB7 Achaete-scute homolog 5 OS=Mus musculus OX=10090 GN=Ascl5 PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000010413.1 | XP_020629353.1 | helix-loop-helix protein 2-like [Orbicella faveolata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000010429.1 | XP_020629355.1 | achaete-scute homolog 1-like [Orbicella faveolata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000017729.1 | XP_029193772.2 | mesoderm posterior protein 2-like [Acropora millepora] | P97309 Mesoderm posterior protein 1 OS=Mus musculus OX=10090 GN=Mes | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000017740.1 | XP_015779354.1 | PREDICTED: pancreas transcription factor 1 subunit alpha-like [Acropora digitifera] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000017867.1 | CAH3145471.1 | unnamed protein product, partial [Porites evermanni] | D2CLZ9 Transcription factor atoh8 OS=Danio rerio OX=7955 GN=atoh8 P | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027041.1 | XP_020617720.1 | T-cell acute lymphocytic leukemia protein 1 homolog [Orbicella faveolata] | O73823 T-cell acute lymphocytic leukemia protein 1 OS=Xenopus laevi | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027079.1 | XP_029208961.1 | protein lyl-1-like [Acropora millepora] | P27792 Protein lyl-1 OS=Mus musculus OX=10090 GN=Lyl1 PE=2 SV=2 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027170.1 | XP_020617719.1 | T-cell acute lymphocytic leukemia protein 1-like [Orbicella faveolata] | O93507 T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027852.1 | CAH3169452.1 | unnamed protein product [Porites evermanni] | – | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027860.1 | XP_015770452.1 | PREDICTED: neurogenin-3-like [Acropora digitifera] | Q96RJ6 Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV= | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027914.1 | XP_015770453.1 | PREDICTED: twist-related protein-like [Acropora digitifera] | P13903 Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027974.1 | XP_020616252.1 | transcription factor 15-like [Orbicella faveolata] | Q6QHK4 Factor in the germline alpha OS=Homo sapiens OX=9606 GN=FIGL | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027976.1 | XP_015770458.1 | PREDICTED: protein atonal homolog 1-like isoform X1 [Acropora digitifera] | Q96RJ6 Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV= | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000028043.1 | CAH3145635.1 | unnamed protein product [Porites lobata] | P79782 Transcription factor 15 OS=Gallus gallus OX=9031 GN=TCF15 PE | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000028085.1 | XP_027048318.1 | protein atonal homolog 7-A-like [Pocillopora damicornis] | – | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000028104.1 | XP_015770452.1 | PREDICTED: neurogenin-3-like [Acropora digitifera] | Q96RJ6 Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV= | JBrowse |
