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This orthogroup contains 1,399 genes from 131 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,399 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00106 | adh_short — short chain dehydrogenase | 1226 / 1,399 | 87.6% | 99.8% of 1,228 | ≥80% support |
| GO | GO:0016491 Molecular Function | oxidoreductase activity | 1179 / 1,399 | 84.3% | 99.5% of 1,185 | ≥80% support |
| PANTHER | PTHR43391 | RETINOL DEHYDROGENASE-RELATED | 1023 / 1,399 | 73.1% | 82.8% of 1,235 | ≥50% support |
| GO | GO:0005829 Cellular Component | cytosol | 1024 / 1,399 | 73.2% | 86.4% of 1,185 | ≥50% support |
| KEGG | K11150 | RDH8 — Retinol metabolism | 816 / 1,399 | 58.3% | 98.4% of 829 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | 28122_t.1 | none | – | JBrowse | |
| Astreopora myriophthalma | BRAKERYMEP00000003428.1 | CAH3144261.1 | unnamed protein product [Porites lobata] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000003482.1 | CAH3188978.1 | unnamed protein product [Porites evermanni] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000020507.1 | CAH3024683.1 | unnamed protein product [Porites evermanni] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000020540.1 | XP_015761906.1 | PREDICTED: retinol dehydrogenase 8-like [Acropora digitifera] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027007.1 | XP_029206927.2 | retinol dehydrogenase 8-like [Acropora millepora] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027022.1 | XP_015765739.1 | PREDICTED: retinol dehydrogenase 8-like isoform X3 [Acropora digitifera] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027061.1 | XP_044172951.1 | retinol dehydrogenase 8-like [Acropora millepora] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027084.1 | XP_029206902.1 | retinol dehydrogenase 8-like [Acropora millepora] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027099.1 | XP_015765739.1 | PREDICTED: retinol dehydrogenase 8-like isoform X3 [Acropora digitifera] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027150.1 | XP_029209388.1 | retinol dehydrogenase 8-like [Acropora millepora] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027151.1 | XP_029209388.1 | retinol dehydrogenase 8-like [Acropora millepora] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027175.1 | XP_029206927.2 | retinol dehydrogenase 8-like [Acropora millepora] | Q9N126 Retinol dehydrogenase 8 OS=Bos taurus OX=9913 GN=RDH8 PE=1 S | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027177.1 | XP_020611789.1 | retinol dehydrogenase 8-like [Orbicella faveolata] | Q9NYR8 Retinol dehydrogenase 8 OS=Homo sapiens OX=9606 GN=RDH8 PE=1 | JBrowse |
| Astreopora myriophthalma | g10829.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10830.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10832.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10833.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10834.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10835.t1.1 | none | – | JBrowse |
