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Support counts the member genes carrying the term. % of genes is that count over all 929 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10082 | INTEGRIN BETA SUBUNIT | 782 / 929 | 84.2% | 99.9% of 783 | ≥80% support |
| GO | GO:0005178 Molecular Function | integrin binding | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0005925 Cellular Component | focal adhesion | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0007160 Biological Process | cell-matrix adhesion | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0007229 Biological Process | integrin-mediated signaling pathway | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0008305 Cellular Component | integrin complex | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0009986 Cellular Component | cell surface | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0016477 Biological Process | cell migration | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| GO | GO:0033627 Biological Process | cell adhesion mediated by integrin | 782 / 929 | 84.2% | 100.0% of 782 | ≥80% support |
| Pfam | PF00362 | Integrin_beta — Integrin beta chain VWA domain | 670 / 929 | 72.1% | 85.6% of 783 | ≥50% support |
| Pfam | PF08725 | Integrin_b_cyt — Integrin beta cytoplasmic domain | 545 / 929 | 58.7% | 69.6% of 783 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000013806.1 | KAJ7380204.1 | Integrin beta-1 [Desmophyllum pertusum] | Q863C4 Integrin beta-6 OS=Ovis aries OX=9940 GN=ITGB6 PE=2 SV=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000013874.1 | KAJ7380204.1 | Integrin beta-1 [Desmophyllum pertusum] | P11835 Integrin beta-2 OS=Mus musculus OX=10090 GN=Itgb2 PE=1 SV=2 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000013875.1 | KAJ7380204.1 | Integrin beta-1 [Desmophyllum pertusum] | P11835 Integrin beta-2 OS=Mus musculus OX=10090 GN=Itgb2 PE=1 SV=2 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000013880.1 | CAH3144713.1 | unnamed protein product [Porites lobata] | P11584 Integrin beta-PS OS=Drosophila melanogaster OX=7227 GN=mys P | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000018164.1 | XP_029179548.2 | integrin beta-1 [Acropora millepora] | P07228 Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000020781.1 | CAH3183347.1 | unnamed protein product, partial [Porites lobata] | Q1RPR6 Integrin beta-6 OS=Sus scrofa OX=9823 GN=ITGB6 PE=2 SV=1 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000020782.1 | CAH3130447.1 | unnamed protein product [Pocillopora meandrina] | P18563 Integrin beta-6 OS=Cavia porcellus OX=10141 GN=ITGB6 PE=2 SV | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000035961.1 | XP_015772241.1 | PREDICTED: integrin beta-PS-like [Acropora digitifera] | P11584 Integrin beta-PS OS=Drosophila melanogaster OX=7227 GN=mys P | JBrowse |
| Astreopora myriophthalma | g18593.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g18593.t2.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g26504.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g26505.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g26505.t2.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g26511.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g33643.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g6234.t1.1 | none | – | JBrowse |
