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This orthogroup contains 571 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 571 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12271 | POLY A POLYMERASE CID PAP -RELATED | 503 / 571 | 88.1% | 99.8% of 504 | ≥80% support |
| GO | GO:0016779 Molecular Function | nucleotidyltransferase activity | 505 / 571 | 88.4% | 100.0% of 505 | ≥80% support |
| GO | GO:0031123 Biological Process | RNA 3'-end processing | 504 / 571 | 88.3% | 99.8% of 505 | ≥80% support |
| Pfam | PF03828 | PAP_assoc — Cid1 family poly A polymerase | 447 / 571 | 78.3% | 92.2% of 485 | ≥50% support |
| GO | GO:0004652 Molecular Function | obsolete polynucleotide adenylyltransferase activity | 413 / 571 | 72.3% | 81.8% of 505 | ≥50% support |
| GO | GO:0006378 Biological Process | obsolete mRNA polyadenylation | 412 / 571 | 72.2% | 81.6% of 505 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000002013.1 | XP_029184746.2 | poly(A) RNA polymerase GLD2-A-like [Acropora millepora] | Q641A1 Poly(A) RNA polymerase GLD2-A OS=Xenopus laevis OX=8355 GN=t | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000002208.1 | XP_044178375.1 | LOW QUALITY PROTEIN: poly(A) RNA polymerase GLD2-B-like [Acropora millepora] | Q641A1 Poly(A) RNA polymerase GLD2-A OS=Xenopus laevis OX=8355 GN=t | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000003437.1 | XP_029187252.2 | poly(A) RNA polymerase GLD2-like [Acropora millepora] | Q0VFA3 Poly(A) RNA polymerase GLD2 OS=Xenopus tropicalis OX=8364 GN | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000029531.1 | XP_044164545.1 | poly(A) RNA polymerase GLD2-B-like [Acropora millepora] | Q503I9 Poly(A) RNA polymerase GLD2 OS=Danio rerio OX=7955 GN=tent2 | JBrowse |
| Astreopora myriophthalma | g14170.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g33345.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g34173.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g34178.t1.1 | none | – | JBrowse |
