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Support counts the member genes carrying the term. % of genes is that count over all 341 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21497 | UBIQUITIN LIGASE E3 ALPHA-RELATED | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0071596 Biological Process | ubiquitin-dependent protein catabolic process via the N-end rule pathway | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| Pfam | PF18995 | PRT6_C — Proteolysis_6 C-terminal | 174 / 341 | 51.0% | 72.8% of 239 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000025737.1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q5U430 E3 ubiquitin-protein ligase UBR3 OS=Mus musculus OX=10090 GN | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000025754.1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q6ZT12 E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000025755.1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q6ZT12 E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000025756.1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q6ZT12 E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Astreopora myriophthalma | g10662.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10663.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10663.t2.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10663.t3.1 | none | – | JBrowse |
