← Back to the gene family browser
This orthogroup contains 327 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 327 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10799 | SNF2/RAD54 HELICASE FAMILY | 263 / 327 | 80.4% | 92.6% of 284 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 275 / 327 | 84.1% | 95.2% of 289 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 263 / 327 | 80.4% | 91.0% of 289 | ≥80% support |
| GO | GO:0008094 Molecular Function | ATP-dependent activity, acting on DNA | 263 / 327 | 80.4% | 91.0% of 289 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 263 / 327 | 80.4% | 91.0% of 289 | ≥80% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 248 / 327 | 75.8% | 86.1% of 288 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 238 / 327 | 72.8% | 82.6% of 288 | ≥50% support |
| Pfam | PF14619 | SnAC — Snf2-ATP coupling, chromatin remodelling complex | 237 / 327 | 72.5% | 82.3% of 288 | ≥50% support |
| Pfam | PF00439 | Bromodomain | 233 / 327 | 71.3% | 80.9% of 288 | ≥50% support |
| Pfam | PF07533 | BRK | 221 / 327 | 67.6% | 76.7% of 288 | ≥50% support |
| Pfam | PF07529 | HSA | 221 / 327 | 67.6% | 76.7% of 288 | ≥50% support |
| Pfam | PF08880 | QLQ | 202 / 327 | 61.8% | 70.1% of 288 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 260 / 327 | 79.5% | 90.0% of 289 | ≥50% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 258 / 327 | 78.9% | 89.3% of 289 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 258 / 327 | 78.9% | 89.3% of 289 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 248 / 327 | 75.8% | 85.8% of 289 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 237 / 327 | 72.5% | 82.0% of 289 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 209 / 327 | 63.9% | 72.3% of 289 | ≥50% support |
| KEGG | K11647 | SMARCA2_4 — Chromosome and associated proteins | 187 / 327 | 57.2% | 94.4% of 198 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000027052.1 | KAJ7378679.1 | Transcription activator BRG1 [Desmophyllum pertusum] | Q6DIC0 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027080.1 | XP_020617696.1 | transcription activator BRG1-like isoform X3 [Orbicella faveolata] | Q6DIC0 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027111.1 | XP_044163993.1 | transcription activator BRG1-like isoform X2 [Acropora millepora] | A7Z019 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000027164.1 | XP_044164031.1 | transcription activator BRG1-like isoform X2 [Acropora millepora] | A7Z019 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Astreopora myriophthalma | g10790.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10792.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10793.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g10877.t1.1 | none | – | JBrowse |
