← Back to the gene family browser
This orthogroup contains 300 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 300 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11618 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED | 260 / 300 | 86.7% | 99.6% of 261 | ≥80% support |
| Pfam | PF00382 | TFIIB | 253 / 300 | 84.3% | 93.4% of 271 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 261 / 300 | 87.0% | 99.6% of 262 | ≥80% support |
| GO | GO:0000126 Cellular Component | transcription factor TFIIIB complex | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0000995 Molecular Function | RNA polymerase III general transcription initiation factor activity | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0001006 Molecular Function | RNA polymerase III type 3 promoter sequence-specific DNA binding | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0006383 Biological Process | transcription by RNA polymerase III | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0070897 Biological Process | transcription preinitiation complex assembly | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0097550 Cellular Component | transcription preinitiation complex | 260 / 300 | 86.7% | 99.2% of 262 | ≥80% support |
| GO | GO:0017025 Molecular Function | TBP-class protein binding | 253 / 300 | 84.3% | 96.6% of 262 | ≥80% support |
| Pfam | PF07741 | BRF1 | 239 / 300 | 79.7% | 88.2% of 271 | ≥50% support |
| Pfam | PF08271 | TF_Zn_Ribbon — TFIIB zinc-binding | 200 / 300 | 66.7% | 73.8% of 271 | ≥50% support |
| KEGG | K15196 | BRF1, GTF3B — Transcription machinery | 233 / 300 | 77.7% | 99.2% of 235 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000038050.1 | XP_029201891.2 | transcription factor IIIB 90 kDa subunit-like isoform X1 [Acropora millepora] | Q92994 Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX= | JBrowse |
| Astreopora myriophthalma | g12887.t1.1 | none | – | JBrowse |
