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This orthogroup contains 279 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 279 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12687 | NUCLEOLAR COMPLEX 2 AND RAD4-RELATED | 240 / 279 | 86.0% | 98.8% of 243 | ≥80% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 240 / 279 | 86.0% | 99.6% of 241 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 240 / 279 | 86.0% | 99.6% of 241 | ≥80% support |
| GO | GO:0030690 Cellular Component | Noc1p-Noc2p complex | 240 / 279 | 86.0% | 99.6% of 241 | ≥80% support |
| GO | GO:0030691 Cellular Component | Noc2p-Noc3p complex | 240 / 279 | 86.0% | 99.6% of 241 | ≥80% support |
| GO | GO:0042273 Biological Process | ribosomal large subunit biogenesis | 240 / 279 | 86.0% | 99.6% of 241 | ≥80% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 227 / 279 | 81.4% | 94.2% of 241 | ≥80% support |
| GO | GO:0003714 Molecular Function | transcription corepressor activity | 227 / 279 | 81.4% | 94.2% of 241 | ≥80% support |
| GO | GO:0042393 Molecular Function | histone binding | 227 / 279 | 81.4% | 94.2% of 241 | ≥80% support |
| Pfam | PF03715 | Noc2 | 218 / 279 | 78.1% | 98.6% of 221 | ≥50% support |
| KEGG | K14833 | NOC2 — Ribosome biogenesis | 177 / 279 | 63.4% | 98.9% of 179 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000019952.1 | KAJ7394445.1 | Nucleolar complex protein 2 [Desmophyllum pertusum] | Q9WV70 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000019953.1 | KAJ7394445.1 | Nucleolar complex protein 2 [Desmophyllum pertusum] | Q9WV70 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 | JBrowse |
| Astreopora myriophthalma | g14577.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g14577.t2.1 | none | – | JBrowse |
