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This orthogroup contains 278 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 278 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11037 | TRANSCRIPTION FACTOR CP2 | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| Pfam | PF04516 | CP2 | 230 / 278 | 82.7% | 93.1% of 247 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| GO | GO:0001228 Molecular Function | DNA-binding transcription activator activity, RNA polymerase II-specific | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 238 / 278 | 85.6% | 100.0% of 238 | ≥80% support |
| Pfam | PF18016 | SAM_3 — SAM domain (Sterile alpha motif) | 209 / 278 | 75.2% | 84.6% of 247 | ≥50% support |
| KEGG | K09275 | TFCP2 — Transcription factors | 165 / 278 | 59.4% | 95.9% of 172 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000025099.1 | XP_015772254.1 | PREDICTED: transcription factor CP2-like isoform X2 [Acropora digitifera] | Q9NZI7 Upstream-binding protein 1 OS=Homo sapiens OX=9606 GN=UBP1 P | JBrowse |
| Astreopora myriophthalma | g10493.t1.1 | none | – | JBrowse |
