← Back to the gene family browser
This orthogroup contains 278 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 278 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12389 | ZINC FINGER PROTEIN 294 | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:0043023 Molecular Function | ribosomal large subunit binding | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:0072344 Biological Process | rescue of stalled ribosome | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:1990112 Cellular Component | RQC complex | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:1990116 Biological Process | ribosome-associated ubiquitin-dependent protein catabolic process | 237 / 278 | 85.3% | 99.6% of 238 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 156 / 278 | 56.1% | 65.6% of 238 | ≥50% support |
| KEGG | K22377 | LTN1 — Ubiquitin system | 159 / 278 | 57.2% | 98.2% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000008635.1 | XP_029193500.2 | E3 ubiquitin-protein ligase listerin-like [Acropora millepora] | A0JM49 E3 ubiquitin-protein ligase listerin OS=Xenopus tropicalis O | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000008636.1 | XP_029193500.2 | E3 ubiquitin-protein ligase listerin-like [Acropora millepora] | A0JM49 E3 ubiquitin-protein ligase listerin OS=Xenopus tropicalis O | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000008767.1 | XP_022790164.1 | LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like [Stylophora pistillata] | E1C231 E3 ubiquitin-protein ligase listerin OS=Gallus gallus OX=903 | JBrowse |
| Astreopora myriophthalma | g21188.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g21188.t2.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g21189.t1.1 | none | – | JBrowse |
