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This orthogroup contains 268 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 268 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0003723 Molecular Function | RNA binding | 226 / 268 | 84.3% | 99.6% of 227 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 226 / 268 | 84.3% | 99.6% of 227 | ≥80% support |
| GO | GO:0009982 Molecular Function | pseudouridine synthase activity | 226 / 268 | 84.3% | 99.6% of 227 | ≥80% support |
| GO | GO:1990481 Biological Process | mRNA pseudouridine synthesis | 226 / 268 | 84.3% | 99.6% of 227 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 216 / 268 | 80.6% | 95.2% of 227 | ≥80% support |
| GO | GO:0009451 Biological Process | RNA modification | 216 / 268 | 80.6% | 95.2% of 227 | ≥80% support |
| PANTHER | PTHR23127 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 | 204 / 268 | 76.1% | 89.9% of 227 | ≥50% support |
| Pfam | PF16198 | TruB_C_2 — tRNA pseudouridylate synthase B C-terminal domain | 209 / 268 | 78.0% | 93.3% of 224 | ≥50% support |
| Pfam | PF01509 | TruB_N — TruB family pseudouridylate synthase (N terminal domain) | 203 / 268 | 75.8% | 90.6% of 224 | ≥50% support |
| Pfam | PF01472 | PUA | 193 / 268 | 72.0% | 86.2% of 224 | ≥50% support |
| Pfam | PF08068 | DKCLD | 181 / 268 | 67.5% | 80.8% of 224 | ≥50% support |
| GO | GO:0000495 Biological Process | box H/ACA sno(s)RNA 3'-end processing | 204 / 268 | 76.1% | 89.9% of 227 | ≥50% support |
| GO | GO:0031118 Biological Process | rRNA pseudouridine synthesis | 204 / 268 | 76.1% | 89.9% of 227 | ≥50% support |
| GO | GO:0031120 Biological Process | snRNA pseudouridine synthesis | 204 / 268 | 76.1% | 89.9% of 227 | ≥50% support |
| GO | GO:0031429 Cellular Component | box H/ACA snoRNP complex | 204 / 268 | 76.1% | 89.9% of 227 | ≥50% support |
| KEGG | K11131 | DKC1, NOLA4, CBF5 — DNA replication proteins | 190 / 268 | 70.9% | 91.4% of 208 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000004947.1 | XP_020608399.1 | H/ACA ribonucleoprotein complex subunit 4-like [Orbicella faveolata] | Q5ZJH9 H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallu | JBrowse |
| Astreopora myriophthalma | g25447.t1.1 | none | – | JBrowse |
