← Back to the gene family browser
This orthogroup contains 265 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 265 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13003 | NUP107-RELATED | 229 / 265 | 86.4% | 100.0% of 229 | ≥80% support |
| Pfam | PF04121 | Nup84_Nup100 — Nuclear pore protein 84 / 107 | 229 / 265 | 86.4% | 100.0% of 229 | ≥80% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 230 / 265 | 86.8% | 100.0% of 230 | ≥80% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 230 / 265 | 86.8% | 100.0% of 230 | ≥80% support |
| GO | GO:0000973 Biological Process | post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 229 / 265 | 86.4% | 99.6% of 230 | ≥80% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 229 / 265 | 86.4% | 99.6% of 230 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 229 / 265 | 86.4% | 99.6% of 230 | ≥80% support |
| GO | GO:0031080 Cellular Component | nuclear pore outer ring | 229 / 265 | 86.4% | 99.6% of 230 | ≥80% support |
| KEGG | K14301 | NUP107, NUP84 — Chromosome and associated proteins | 187 / 265 | 70.6% | 98.9% of 189 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000012207.1 | XP_044171028.1 | nuclear pore complex protein Nup107-like [Acropora millepora] | – | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000012351.1 | XP_044171028.1 | nuclear pore complex protein Nup107-like [Acropora millepora] | Q8BH74 Nuclear pore complex protein Nup107 OS=Mus musculus OX=10090 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000012424.1 | XP_044171028.1 | nuclear pore complex protein Nup107-like [Acropora millepora] | P57740 Nuclear pore complex protein Nup107 OS=Homo sapiens OX=9606 | JBrowse |
| Astreopora myriophthalma | g28844.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g28847.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g28849.t1.1 | none | – | JBrowse |
