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This orthogroup contains 254 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 254 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12965 | VACUOLAR PROTEIN SORTING 54 | 218 / 254 | 85.8% | 99.5% of 219 | ≥80% support |
| GO | GO:0042147 Biological Process | retrograde transport, endosome to Golgi | 219 / 254 | 86.2% | 100.0% of 219 | ≥80% support |
| GO | GO:0000938 Cellular Component | GARP complex | 218 / 254 | 85.8% | 99.5% of 219 | ≥80% support |
| GO | GO:0006896 Biological Process | Golgi to vacuole transport | 218 / 254 | 85.8% | 99.5% of 219 | ≥80% support |
| GO | GO:0019905 Molecular Function | syntaxin binding | 218 / 254 | 85.8% | 99.5% of 219 | ≥80% support |
| Pfam | PF07928 | Vps54 | 184 / 254 | 72.4% | 90.6% of 203 | ≥50% support |
| Pfam | PF10475 | Vps54_N — Vacuolar-sorting protein 54, of GARP complex | 159 / 254 | 62.6% | 78.3% of 203 | ≥50% support |
| KEGG | K17600 | VPS54 — Membrane trafficking | 156 / 254 | 61.4% | 96.9% of 161 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000002451.1 | CAH3149987.1 | unnamed protein product [Porites lobata] | Q9P1Q0 Vacuolar protein sorting-associated protein 54 OS=Homo sapie | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000002463.1 | XP_044178843.1 | vacuolar protein sorting-associated protein 54-like isoform X2 [Acropora millepora] | Q9P1Q0 Vacuolar protein sorting-associated protein 54 OS=Homo sapie | JBrowse |
| Astreopora myriophthalma | g4783.t1.1 | none | – | JBrowse | |
| Astreopora myriophthalma | g4786.t1.1 | none | – | JBrowse |
