← Back to the gene family browser
This orthogroup contains 238 genes from 134 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 238 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR37457 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED | 192 / 238 | 80.7% | 94.1% of 204 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 200 / 238 | 84.0% | 98.0% of 204 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 193 / 238 | 81.1% | 94.6% of 204 | ≥80% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 191 / 238 | 80.3% | 93.6% of 204 | ≥80% support |
| GO | GO:0001514 Biological Process | selenocysteine incorporation | 191 / 238 | 80.3% | 93.6% of 204 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 191 / 238 | 80.3% | 93.6% of 204 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 188 / 238 | 79.0% | 96.4% of 195 | ≥50% support |
| Pfam | PF17654 | Trnau1ap — Selenocysteine tRNA 1 associated proteins | 121 / 238 | 50.8% | 62.1% of 195 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000032890.1 | XP_029198290.2 | tRNA selenocysteine 1-associated protein 1-like [Acropora millepora] | Q9NX07 tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens O | JBrowse |
| Astreopora myriophthalma | g3405.t1.1 | none | – | JBrowse |
