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This orthogroup contains 210 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 210 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23081 | RNA POLYMERASE II CTD PHOSPHATASE | 162 / 210 | 77.1% | 93.1% of 174 | ≥50% support |
| Pfam | PF03031 | NIF — NLI interacting factor-like phosphatase | 159 / 210 | 75.7% | 94.1% of 169 | ≥50% support |
| Pfam | PF00533 | BRCT | 122 / 210 | 58.1% | 72.2% of 169 | ≥50% support |
| GO | GO:0008420 Molecular Function | RNA polymerase II CTD heptapeptide repeat phosphatase activity | 162 / 210 | 77.1% | 93.1% of 174 | ≥50% support |
| GO | GO:0070940 Biological Process | obsolete dephosphorylation of RNA polymerase II C-terminal domain | 162 / 210 | 77.1% | 93.1% of 174 | ≥50% support |
| GO | GO:0004721 Molecular Function | phosphoprotein phosphatase activity | 150 / 210 | 71.4% | 86.2% of 174 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 150 / 210 | 71.4% | 86.2% of 174 | ≥50% support |
| KEGG | K15732 | CTDP1, FCP1 — Transcription machinery | 146 / 210 | 69.5% | 100.0% of 146 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astreopora myriophthalma | BRAKERYMEP00000020672.1 | XP_015772091.1 | PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase-like [Acropora digitifera] | Q7TSG2 RNA polymerase II subunit A C-terminal domain phosphatase OS | JBrowse |
| Astreopora myriophthalma | g5457.t1.1 | none | – | JBrowse |
