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Support counts the member genes carrying the term. % of genes is that count over all 189 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11685 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| Pfam | PF01485 | IBR | 173 / 189 | 91.5% | 100.0% of 173 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0031624 Molecular Function | ubiquitin conjugating enzyme binding | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0032436 Biological Process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 173 / 189 | 91.5% | 98.9% of 175 | ≥80% support |
| KEGG | K11975 | RNF144 — Ubiquitin system | 105 / 189 | 55.6% | 100.0% of 105 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074636551.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora palmata | XP_074636552.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora palmata | XP_074636553.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora palmata | XP_074636554.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora palmata | XP_074636555.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
