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Support counts the member genes carrying the term. % of genes is that count over all 189 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11685 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| Pfam | PF01485 | IBR | 173 / 189 | 91.5% | 100.0% of 173 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0031624 Molecular Function | ubiquitin conjugating enzyme binding | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0032436 Biological Process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 175 / 189 | 92.6% | 100.0% of 175 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 173 / 189 | 91.5% | 98.9% of 175 | ≥80% support |
| KEGG | K11975 | RNF144 — Ubiquitin system | 105 / 189 | 55.6% | 100.0% of 105 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0299.g3.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Aurelia aurita complex sp. Pacific | scaffold363.g17.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000046968.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | A4IIY1 Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus trop | JBrowse |
| Acropora austera | ENSKKQP00000046980.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | A4IIY1 Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus trop | JBrowse |
| Acropora austera | ENSKKQP00000046988.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | A4IIY1 Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus trop | JBrowse |
| Acropora awi | aawi_s0257.g31.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0257.g31.t2 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0257.g31.t3 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | – | JBrowse |
| Acropora cervicornis | KAK2558360.1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0051.g131.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora digitifera | chr9Alt.g20737.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0157.g15.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350045097-PA | XP_031569634.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa] | Q6DH94 Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio reri | JBrowse |
| Actinia equina | EGACTEQ4350045097-PB | XP_031569634.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa] | Q6DH94 Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio reri | JBrowse |
| Actinia equina | EGACTEQ4350045097-PC | XP_031569634.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa] | – | JBrowse |
| Acropora gemmifera | agem_s0202.g7.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora hemprichii | Ahemp_008328-T1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Acropora hyacinthus | ahya_s0038.g3.t1 | XP_029191467.1 | E3 ubiquitin-protein ligase RNF144A-like [Acropora millepora] | Q8BKD6 E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g6371 | XP_031569634.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa] | Q925F3 E3 ubiquitin-protein ligase RNF144A OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g6406 | XP_031569634.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa] | Q925F3 E3 ubiquitin-protein ligase RNF144A OS=Mus musculus OX=10090 | JBrowse |
