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Support counts the member genes carrying the term. % of genes is that count over all 778 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 631 / 778 | 81.1% | 94.9% of 665 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 653 / 778 | 83.9% | 97.9% of 667 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 638 / 778 | 82.0% | 95.7% of 667 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 635 / 778 | 81.6% | 95.2% of 667 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 631 / 778 | 81.1% | 94.6% of 667 | ≥80% support |
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 618 / 778 | 79.4% | 93.2% of 663 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 611 / 778 | 78.5% | 91.9% of 665 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 618 / 778 | 79.4% | 92.7% of 667 | ≥50% support |
| GO | GO:0007276 Biological Process | gamete generation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0043186 Cellular Component | P granule | 429 / 778 | 55.1% | 64.3% of 667 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap14.1357 | XP_022779027.1 | ATP-dependent RNA helicase DED1-like isoform X2 [Stylophora pistillata] | Q5W5U4 Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus OX=99 | JBrowse |
| Astrangia poculata | evm.model.Ap14.1361 | XP_020608030.1 | probable ATP-dependent RNA helicase DDX4 [Orbicella faveolata] | Q08935 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylve | JBrowse |
| Astrangia poculata | evm.model.Ap14.1790 | XP_022783312.1 | probable ATP-dependent RNA helicase DDX4 [Stylophora pistillata] | Q61496 ATP-dependent RNA helicase DDX4 OS=Mus musculus OX=10090 GN= | JBrowse |
| Astrangia poculata | evm.model.Ap4.2108 | none | – | JBrowse | |
| Astrangia poculata | evm.model.Ap4.3099 | XP_020608030.1 | probable ATP-dependent RNA helicase DDX4 [Orbicella faveolata] | Q4R5S7 Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicula | JBrowse |
| Astrangia poculata | evm.model.Ap4.3100 | XP_015780253.1 | PREDICTED: probable ATP-dependent RNA helicase DDX4 isoform X3 [Acropora digitifera] | Q9VHP0 ATP-dependent RNA helicase bel OS=Drosophila melanogaster OX | JBrowse |
| Astrangia poculata | evm.model.Ap8.2586 | XP_020603001.1 | ATP-dependent RNA helicase DDX3X-like [Orbicella faveolata] | Q6GVM6 ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes OX=9598 | JBrowse |
