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This orthogroup contains 1,962 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,962 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18934 | ATP-DEPENDENT RNA HELICASE | 1572 / 1,962 | 80.1% | 96.8% of 1,624 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1607 / 1,962 | 81.9% | 98.3% of 1,635 | ≥80% support |
| GO | GO:0004386 Molecular Function | helicase activity | 1572 / 1,962 | 80.1% | 96.2% of 1,635 | ≥80% support |
| GO | GO:0005622 Cellular Component | intracellular anatomical structure | 1572 / 1,962 | 80.1% | 96.2% of 1,635 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 1380 / 1,962 | 70.3% | 86.1% of 1,603 | ≥50% support |
| Pfam | PF07717 | OB_NTP_bind — Oligonucleotide/oligosaccharide-binding (OB)-fold | 1335 / 1,962 | 68.0% | 83.3% of 1,603 | ≥50% support |
| Pfam | PF21010 | HA2_C — Helicase associated domain (HA2), ratchet-like | 1294 / 1,962 | 66.0% | 80.7% of 1,603 | ≥50% support |
| Pfam | PF04408 | HA2_N — Helicase associated domain (HA2), winged-helix | 1190 / 1,962 | 60.7% | 74.2% of 1,603 | ≥50% support |
| Pfam | PF00270 | DEAD | 1176 / 1,962 | 59.9% | 73.4% of 1,603 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1237 / 1,962 | 63.1% | 75.7% of 1,635 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 1195 / 1,962 | 60.9% | 73.1% of 1,635 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_008930-T1 | XP_015757367.1 | PREDICTED: probable ATP-dependent RNA helicase DHX35 [Acropora digitifera] | Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX | JBrowse |
| Acropora pulchra | FUN_023393-T1 | XP_029209649.1 | putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 [Acropora millepora] | Q7K3M5 ATP-dependent RNA helicase DHX15 homolog OS=Drosophila melan | JBrowse |
| Acropora pulchra | FUN_023393-T2 | XP_029209649.1 | putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 [Acropora millepora] | O43143 ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora pulchra | FUN_027086-T1 | XP_029202298.2 | ATP-dependent RNA helicase DHX8-like [Acropora millepora] | Q14562 ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=D | JBrowse |
| Acropora pulchra | FUN_035453-T1 | XP_015779906.1 | PREDICTED: ATP-dependent RNA helicase DEAH12, chloroplastic-like [Acropora digitifera] | F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidop | JBrowse |
| Acropora pulchra | FUN_035456-T1 | XP_044175028.1 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Acropora millepora] | F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidop | JBrowse |
| Acropora pulchra | FUN_035598-T1 | XP_029195125.2 | LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like [Acropora millepora] | Q17R09 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS | JBrowse |
| Acropora pulchra | FUN_035598-T2 | XP_029195125.2 | LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like [Acropora millepora] | Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS | JBrowse |
| Acropora pulchra | FUN_035598-T3 | XP_029195125.2 | LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like [Acropora millepora] | Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS | JBrowse |
| Acropora pulchra | FUN_035825-T1 | XP_029195996.2 | ATP-dependent RNA helicase DHX33-like [Acropora millepora] | Q80VY9 ATP-dependent RNA helicase DHX33 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora pulchra | FUN_035864-T1 | XP_029201392.2 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Acropora millepora] | O60231 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS | JBrowse |
| Acropora pulchra | FUN_038431-T1 | XP_044163181.1 | probable ATP-dependent RNA helicase DHX40 [Acropora millepora] | Q8IX18 Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens OX | JBrowse |
