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This orthogroup contains 1,759 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_015158-T1 | XP_029184523.1 | RNA-binding protein Musashi homolog 2-like isoform X1 [Acropora millepora] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Acropora pulchra | FUN_022780-T1 | XP_015777019.1 | PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform X1 [Acropora digitifera] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora pulchra | FUN_032313-T1 | XP_015771868.1 | PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform X3 [Acropora digitifera] | Q99020 Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus | JBrowse |
| Acropora pulchra | FUN_037686-T1 | XP_029186895.2 | DAZ-associated protein 1-like [Acropora millepora] | G5EFS2 RNA-binding protein Musashi homolog 1 OS=Caenorhabditis eleg | JBrowse |
| Acropora pulchra | FUN_040684-T1 | XP_029211579.1 | RNA-binding protein Musashi homolog 2-like [Acropora millepora] | G5EFS2 RNA-binding protein Musashi homolog 1 OS=Caenorhabditis eleg | JBrowse |
| Acropora pulchra | FUN_043391-T1 | XP_044172456.1 | heterogeneous nuclear ribonucleoprotein A3-like [Acropora millepora] | Q99020 Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus | JBrowse |
| Acropora pulchra | FUN_043392-T1 | XP_044172456.1 | heterogeneous nuclear ribonucleoprotein A3-like [Acropora millepora] | Q32P51 Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sa | JBrowse |
