← Back to the gene family browser
This orthogroup contains 1,738 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,738 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24240 | OPSIN | 1538 / 1,738 | 88.5% | 99.2% of 1,551 | ≥80% support |
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 1530 / 1,738 | 88.0% | 99.9% of 1,531 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 1552 / 1,738 | 89.3% | 99.9% of 1,554 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1551 / 1,738 | 89.2% | 99.8% of 1,554 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 1539 / 1,738 | 88.6% | 99.0% of 1,554 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 1537 / 1,738 | 88.4% | 98.9% of 1,554 | ≥80% support |
| GO | GO:0007602 Biological Process | phototransduction | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_001257-T1 | QKY88515.2 | Acropsin 1 [Acropora millepora] | Q804X9 Melanopsin-A OS=Gadus morhua OX=8049 GN=opn4a PE=2 SV=1 | JBrowse |
| Acropora pulchra | FUN_017804-T1 | XP_029190280.1 | melanopsin-like [Acropora millepora] | P51475 Pinopsin OS=Gallus gallus OX=9031 PE=1 SV=1 | JBrowse |
| Acropora pulchra | FUN_017805-T1 | XP_029190323.2 | melanopsin-like [Acropora millepora] | O13018 Vertebrate ancient opsin OS=Salmo salar OX=8030 PE=1 SV=1 | JBrowse |
| Acropora pulchra | FUN_024112-T1 | XP_029207997.1 | melanopsin-A-like [Acropora millepora] | Q804X9 Melanopsin-A OS=Gadus morhua OX=8049 GN=opn4a PE=2 SV=1 | JBrowse |
| Acropora pulchra | FUN_025557-T1 | XP_015764657.1 | PREDICTED: melanopsin-like [Acropora digitifera] | Q9QXZ9 Melanopsin OS=Mus musculus OX=10090 GN=Opn4 PE=1 SV=1 | JBrowse |
| Acropora pulchra | FUN_035234-T1 | QKY88516.2 | Acropsin 2 [Acropora millepora] | Q4U4D2 Melanopsin OS=Podarcis siculus OX=65484 GN=OPN4 PE=2 SV=2 | JBrowse |
