← Back to the gene family browser
This orthogroup contains 1,209 genes from 125 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,209 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 1100 / 1,209 | 91.0% | 99.7% of 1,103 | ≥80% support |
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 912 / 1,209 | 75.4% | 83.8% of 1,089 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_012397-T1 | XP_029211836.2 | uncharacterized PE-PGRS family protein PE_PGRS54-like [Acropora millepora] | Q80X19 Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col1 | JBrowse |
| Acropora pulchra | FUN_012397-T2 | XP_029211836.2 | uncharacterized PE-PGRS family protein PE_PGRS54-like [Acropora millepora] | Q80X19 Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col1 | JBrowse |
| Acropora pulchra | FUN_012398-T1 | XP_029211836.2 | uncharacterized PE-PGRS family protein PE_PGRS54-like [Acropora millepora] | – | JBrowse |
| Acropora pulchra | FUN_012398-T2 | XP_029211836.2 | uncharacterized PE-PGRS family protein PE_PGRS54-like [Acropora millepora] | – | JBrowse |
| Acropora pulchra | FUN_014471-T1 | XP_015754877.1 | PREDICTED: uncharacterized protein LOC107334452 [Acropora digitifera] | Q8VHI5 Vitrin OS=Mus musculus OX=10090 GN=Vit PE=1 SV=2 | JBrowse |
| Acropora pulchra | FUN_014579-T1 | XP_029194201.2 | uncharacterized protein LOC114960116 [Acropora millepora] | – | JBrowse |
| Acropora pulchra | FUN_014580-T1 | XP_029194201.2 | uncharacterized protein LOC114960116 [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora pulchra | FUN_014820-T1 | CAH3017641.1 | unnamed protein product [Porites evermanni] | – | JBrowse |
| Acropora pulchra | FUN_014822-T1 | XP_020613811.1 | vitrin-like [Orbicella faveolata] | Q8C6K9 Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora pulchra | FUN_014923-T1 | XP_044173667.1 | uncharacterized protein LOC114960368 [Acropora millepora] | – | JBrowse |
| Acropora pulchra | FUN_015394-T1 | XP_015751394.1 | PREDICTED: uncharacterized protein LOC107331302 [Acropora digitifera] | – | JBrowse |
| Acropora pulchra | FUN_029523-T1 | XP_044164432.1 | collagen alpha-6(VI) chain-like [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
