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Support counts the member genes carrying the term. % of genes is that count over all 1,129 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12706 | STRAWBERRY NOTCH-RELATED | 964 / 1,129 | 85.4% | 99.9% of 965 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 964 / 1,129 | 85.4% | 99.9% of 965 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 964 / 1,129 | 85.4% | 99.9% of 965 | ≥80% support |
| GO | GO:0031490 Molecular Function | chromatin DNA binding | 963 / 1,129 | 85.3% | 99.8% of 965 | ≥80% support |
| GO | GO:0042393 Molecular Function | histone binding | 963 / 1,129 | 85.3% | 99.8% of 965 | ≥80% support |
| Pfam | PF13872 | AAA_34 — P-loop containing NTP hydrolase pore-1 | 691 / 1,129 | 61.2% | 76.9% of 899 | ≥50% support |
| Pfam | PF13871 | Helicase_C_4 — C-terminal domain on Strawberry notch homologue | 627 / 1,129 | 55.5% | 69.7% of 899 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_015490-T1 | XP_044174018.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | Q5F371 Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora pulchra | FUN_015514-T1 | XP_015747328.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | Q5F371 Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora pulchra | FUN_015515-T1 | XP_044171919.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015541-T1 | XP_015773581.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015567-T1 | XP_015773581.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015570-T1 | XP_044174019.1 | protein strawberry notch homolog 1-like isoform X2 [Acropora millepora] | Q5F371 Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora pulchra | FUN_015572-T1 | XP_044170601.1 | protein strawberry notch homolog 1-like isoform X2 [Acropora millepora] | A0JND4 Protein strawberry notch homolog 2 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora pulchra | FUN_015621-T1 | XP_015747328.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | Q5BJL5 Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora pulchra | FUN_015622-T1 | XP_015773581.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015623-T1 | XP_044170600.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | Q5F371 Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora pulchra | FUN_015650-T1 | XP_015747328.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | Q5BJL5 Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora pulchra | FUN_015651-T1 | XP_044171923.1 | protein strawberry notch homolog 1-like isoform X5 [Acropora millepora] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015672-T1 | XP_015773581.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015674-T1 | XP_044171919.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | Q5F371 Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora pulchra | FUN_015711-T1 | XP_015773581.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera] | A3KN83 Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora pulchra | FUN_015713-T1 | XP_044170600.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | Q5BJL5 Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora pulchra | FUN_015742-T1 | XP_044165434.1 | protein strawberry notch homolog 1-like [Acropora millepora] | Q689Z5 Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 | JBrowse |
| Acropora pulchra | FUN_015744-T1 | XP_044170601.1 | protein strawberry notch homolog 1-like isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora pulchra | FUN_015765-T1 | XP_044171919.1 | protein strawberry notch homolog 1-like isoform X1 [Acropora millepora] | Q5BJL5 Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora pulchra | FUN_015791-T1 | XP_015769815.1 | PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like, partial [Acropora digitifera] | – | JBrowse |
