← Back to the gene family browser
This orthogroup contains 285 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 285 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45623 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 216 / 285 | 75.8% | 88.9% of 243 | ≥50% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 212 / 285 | 74.4% | 91.8% of 231 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 207 / 285 | 72.6% | 89.6% of 231 | ≥50% support |
| Pfam | PF00385 | Chromo | 206 / 285 | 72.3% | 89.2% of 231 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 218 / 285 | 76.5% | 96.0% of 227 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 214 / 285 | 75.1% | 94.3% of 227 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 194 / 285 | 68.1% | 85.5% of 227 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 193 / 285 | 67.7% | 85.0% of 227 | ≥50% support |
| GO | GO:0000785 Cellular Component | chromatin | 192 / 285 | 67.4% | 84.6% of 227 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 192 / 285 | 67.4% | 84.6% of 227 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 192 / 285 | 67.4% | 84.6% of 227 | ≥50% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 192 / 285 | 67.4% | 84.6% of 227 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 192 / 285 | 67.4% | 84.6% of 227 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 154 / 285 | 54.0% | 67.8% of 227 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_035737-T1 | XP_044175715.1 | LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8-like [Acropora millepora] | Q9P2D1 Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens | JBrowse |
