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Support counts the member genes carrying the term. % of genes is that count over all 256 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 210 / 256 | 82.0% | 96.3% of 218 | ≥80% support |
| Pfam | PF00270 | DEAD | 206 / 256 | 80.5% | 94.1% of 219 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 207 / 256 | 80.9% | 98.6% of 210 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 206 / 256 | 80.5% | 98.1% of 210 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 194 / 256 | 75.8% | 88.6% of 219 | ≥50% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 184 / 256 | 71.9% | 87.6% of 210 | ≥50% support |
| GO | GO:0030490 Biological Process | maturation of SSU-rRNA | 178 / 256 | 69.5% | 84.8% of 210 | ≥50% support |
| KEGG | K14779 | DDX52, ROK1 — Ribosome biogenesis | 173 / 256 | 67.6% | 97.2% of 178 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_036506-T1 | XP_029205560.2 | probable ATP-dependent RNA helicase DDX52 isoform X2 [Acropora millepora] | Q8K301 Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus OX | JBrowse |
| Acropora pulchra | FUN_036506-T2 | XP_029205560.2 | probable ATP-dependent RNA helicase DDX52 isoform X2 [Acropora millepora] | Q8K301 Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus OX | JBrowse |
| Acropora pulchra | FUN_040952-T1 | XP_015760509.1 | PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform X1 [Acropora digitifera] | Q99PT0 Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegic | JBrowse |
| Acropora pulchra | FUN_040952-T2 | XP_015760509.1 | PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform X1 [Acropora digitifera] | Q99PT0 Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegic | JBrowse |
