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This orthogroup contains 244 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 244 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR16105 | UNCHARACTERIZED | 203 / 244 | 83.2% | 99.5% of 204 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 203 / 244 | 83.2% | 99.0% of 205 | ≥80% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 203 / 244 | 83.2% | 99.0% of 205 | ≥80% support |
| GO | GO:0030626 Molecular Function | U12 snRNA binding | 203 / 244 | 83.2% | 99.0% of 205 | ≥80% support |
| GO | GO:0097157 Molecular Function | pre-mRNA intronic binding | 203 / 244 | 83.2% | 99.0% of 205 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 199 / 244 | 81.6% | 97.1% of 205 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 180 / 244 | 73.8% | 99.5% of 181 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 194 / 244 | 79.5% | 94.6% of 205 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_024140-T1 | XP_044177501.1 | RNA-binding protein 41-like isoform X1 [Acropora millepora] | Q96IZ5 RNA-binding protein 41 OS=Homo sapiens OX=9606 GN=RBM41 PE=1 | JBrowse |
