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This orthogroup contains 235 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 235 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11096 | RNA 3' TERMINAL PHOSPHATE CYCLASE | 211 / 235 | 89.8% | 100.0% of 211 | ≥80% support |
| Pfam | PF01137 | RTC — RNA 3'-terminal phosphate cyclase | 210 / 235 | 89.4% | 98.1% of 214 | ≥80% support |
| Pfam | PF05189 | RTC_insert — RNA 3'-terminal phosphate cyclase (RTC), insert domain | 195 / 235 | 83.0% | 91.1% of 214 | ≥80% support |
| GO | GO:0000479 Biological Process | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 211 / 235 | 89.8% | 98.6% of 214 | ≥80% support |
| GO | GO:0004521 Molecular Function | RNA endonuclease activity | 211 / 235 | 89.8% | 98.6% of 214 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 211 / 235 | 89.8% | 98.6% of 214 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 211 / 235 | 89.8% | 98.6% of 214 | ≥80% support |
| GO | GO:0003824 Molecular Function | catalytic activity | 203 / 235 | 86.4% | 94.9% of 214 | ≥80% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 184 / 235 | 78.3% | 86.0% of 214 | ≥50% support |
| KEGG | K11108 | RCL1 — Ribosome biogenesis | 182 / 235 | 77.5% | 99.5% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_004310-T1 | XP_029189477.2 | RNA 3'-terminal phosphate cyclase-like protein [Acropora millepora] | Q9JJT0 RNA 3'-terminal phosphate cyclase-like protein OS=Mus muscul | JBrowse |
