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This orthogroup contains 235 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 235 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12728 | BRIX DOMAIN CONTAINING PROTEIN | 214 / 235 | 91.1% | 99.5% of 215 | ≥80% support |
| Pfam | PF04427 | Brix | 205 / 235 | 87.2% | 99.5% of 206 | ≥80% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 215 / 235 | 91.5% | 100.0% of 215 | ≥80% support |
| GO | GO:0000027 Biological Process | ribosomal large subunit assembly | 214 / 235 | 91.1% | 99.5% of 215 | ≥80% support |
| GO | GO:0000463 Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 214 / 235 | 91.1% | 99.5% of 215 | ≥80% support |
| GO | GO:0000470 Biological Process | maturation of LSU-rRNA | 214 / 235 | 91.1% | 99.5% of 215 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 214 / 235 | 91.1% | 99.5% of 215 | ≥80% support |
| GO | GO:0006364 Biological Process | rRNA processing | 206 / 235 | 87.7% | 95.8% of 215 | ≥80% support |
| KEGG | K14847 | RPF2 — Ribosome biogenesis | 199 / 235 | 84.7% | 98.5% of 202 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_012271-T1 | XP_015759152.1 | PREDICTED: ribosome production factor 2 homolog [Acropora digitifera] | Q9JJ80 Ribosome production factor 2 homolog OS=Mus musculus OX=1009 | JBrowse |
