← Back to the gene family browser
This orthogroup contains 225 genes from 134 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 225 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45781 | AGAP000281-PA | 165 / 225 | 73.3% | 95.9% of 172 | ≥50% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 161 / 225 | 71.6% | 96.4% of 167 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 167 / 225 | 74.2% | 97.1% of 172 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 166 / 225 | 73.8% | 96.5% of 172 | ≥50% support |
| GO | GO:0031490 Molecular Function | chromatin DNA binding | 165 / 225 | 73.3% | 95.9% of 172 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_035465-T1 | XP_029202253.2 | uncharacterized protein PB18E9.04c-like isoform X1 [Acropora millepora] | Q76IQ7 TOX high mobility group box family member 2 OS=Rattus norveg | JBrowse |
| Acropora pulchra | FUN_035465-T2 | XP_029202253.2 | uncharacterized protein PB18E9.04c-like isoform X1 [Acropora millepora] | Q76IQ7 TOX high mobility group box family member 2 OS=Rattus norveg | JBrowse |
