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This orthogroup contains 224 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 224 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13208 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 | 191 / 224 | 85.3% | 100.0% of 191 | ≥80% support |
| Pfam | PF10018 | Med4 — Vitamin-D-receptor interacting Mediator subunit 4 | 192 / 224 | 85.7% | 100.0% of 192 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 194 / 224 | 86.6% | 100.0% of 194 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 194 / 224 | 86.6% | 100.0% of 194 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 194 / 224 | 86.6% | 100.0% of 194 | ≥80% support |
| GO | GO:0070847 Cellular Component | core mediator complex | 191 / 224 | 85.3% | 98.5% of 194 | ≥80% support |
| KEGG | K15146 | MED4 — Transcription machinery | 153 / 224 | 68.3% | 100.0% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_041863-T1 | XP_029189850.2 | mediator of RNA polymerase II transcription subunit 4-like isoform X1 [Acropora millepora] | Q177A7 Mediator of RNA polymerase II transcription subunit 4 OS=Aed | JBrowse |
