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This orthogroup contains 202 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 202 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01248 | Ribosomal_L7Ae — Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 182 / 202 | 90.1% | 100.0% of 182 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 171 / 202 | 84.7% | 98.8% of 173 | ≥80% support |
| KEGG | K11129 | NHP2, NOLA2 — DNA replication proteins | 174 / 202 | 86.1% | 99.4% of 175 | ≥80% support |
| PANTHER | PTHR23105 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER | 160 / 202 | 79.2% | 97.0% of 165 | ≥50% support |
| GO | GO:0000469 Biological Process | obsolete cleavage involved in rRNA processing | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0000470 Biological Process | maturation of LSU-rRNA | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0031118 Biological Process | rRNA pseudouridine synthesis | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0031120 Biological Process | snRNA pseudouridine synthesis | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0031429 Cellular Component | box H/ACA snoRNP complex | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0034513 Molecular Function | box H/ACA snoRNA binding | 160 / 202 | 79.2% | 92.5% of 173 | ≥50% support |
| GO | GO:0005730 Cellular Component | nucleolus | 150 / 202 | 74.3% | 86.7% of 173 | ≥50% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 110 / 202 | 54.5% | 63.6% of 173 | ≥50% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 110 / 202 | 54.5% | 63.6% of 173 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_022965-T1 | XP_044168204.1 | H/ACA ribonucleoprotein complex subunit 2-like protein [Acropora millepora] | Q6NTV9 H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xe | JBrowse |
