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This orthogroup contains 147 genes from 101 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 147 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 126 / 147 | 85.7% | 100.0% of 126 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 128 / 147 | 87.1% | 100.0% of 128 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 126 / 147 | 85.7% | 98.4% of 128 | ≥80% support |
| PANTHER | PTHR23236 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 116 / 147 | 78.9% | 100.0% of 116 | ≥50% support |
| GO | GO:0005730 Cellular Component | nucleolus | 102 / 147 | 69.4% | 79.7% of 128 | ≥50% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 102 / 147 | 69.4% | 79.7% of 128 | ≥50% support |
| GO | GO:0042274 Biological Process | ribosomal small subunit biogenesis | 102 / 147 | 69.4% | 79.7% of 128 | ≥50% support |
| KEGG | K14789 | NOP6 — Ribosome biogenesis | 88 / 147 | 59.9% | 100.0% of 88 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora pulchra | FUN_022058-T1 | XP_029194970.2 | uncharacterized RNA-binding protein C365.04c-like [Acropora millepora] | Q9Y7Y3 Uncharacterized RNA-binding protein C365.04c OS=Schizosaccha | JBrowse |
