← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 2,856 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00104 | Hormone_recep — Ligand-binding domain of nuclear hormone receptor | 2479 / 2,856 | 86.8% | 96.0% of 2,583 | ≥80% support |
| Pfam | PF00105 | zf-C4 — Zinc finger, C4 type (two domains) | 2307 / 2,856 | 80.8% | 89.3% of 2,583 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 2355 / 2,856 | 82.5% | 91.5% of 2,574 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2330 / 2,856 | 81.6% | 90.5% of 2,574 | ≥80% support |
| GO | GO:0004879 Molecular Function | nuclear receptor activity | 2321 / 2,856 | 81.3% | 90.2% of 2,574 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| PANTHER | PTHR24083 | NUCLEAR HORMONE RECEPTOR | 1684 / 2,856 | 59.0% | 65.4% of 2,575 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1971 / 2,856 | 69.0% | 76.6% of 2,574 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 1694 / 2,856 | 59.3% | 65.8% of 2,574 | ≥50% support |
| GO | GO:0048856 Biological Process | anatomical structure development | 1684 / 2,856 | 59.0% | 65.4% of 2,574 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000002160.1 | XP_031573544.1 | nuclear receptor subfamily 2 group C member 1-like [Actinia tenebrosa] | Q5RCZ5 Nuclear receptor subfamily 2 group C member 1 OS=Pongo abeli | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000002163.1 | XP_031573544.1 | nuclear receptor subfamily 2 group C member 1-like [Actinia tenebrosa] | Q505F1 Nuclear receptor subfamily 2 group C member 1 OS=Mus musculu | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000007179.1 | XP_031565264.1 | nuclear receptor subfamily 2 group E member 1-like [Actinia tenebrosa] | Q91379 Nuclear receptor subfamily 2 group E member 1 OS=Gallus gall | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000012234.1 | XP_020907877.1 | photoreceptor-specific nuclear receptor [Exaiptasia diaphana] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000013113.1 | XP_031559605.1 | hepatocyte nuclear factor 4-gamma-like isoform X1 [Actinia tenebrosa] | Q91766 Hepatocyte nuclear factor 4-alpha OS=Xenopus laevis OX=8355 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000016867.1 | XP_031555797.1 | retinoic acid receptor RXR-gamma-A-like [Actinia tenebrosa] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000016872.1 | XP_031555797.1 | retinoic acid receptor RXR-gamma-A-like [Actinia tenebrosa] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000016876.1 | XP_031555797.1 | retinoic acid receptor RXR-gamma-A-like [Actinia tenebrosa] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000022305.1 | XP_031560453.1 | COUP transcription factor 2-like [Actinia tenebrosa] | Q9TTR7 COUP transcription factor 2 OS=Bos taurus OX=9913 GN=NR2F2 P | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000023501.1 | XP_031560451.1 | nuclear receptor subfamily 2 group F member 1-B-like [Actinia tenebrosa] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000024048.1 | XP_031554155.1 | steroid hormone receptor ERR2-like [Actinia tenebrosa] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000024057.1 | XP_031554155.1 | steroid hormone receptor ERR2-like [Actinia tenebrosa] | P11475 Steroid hormone receptor ERR2 OS=Rattus norvegicus OX=10116 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000024194.1 | XP_031566491.1 | COUP transcription factor 2-like isoform X2 [Actinia tenebrosa] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000024203.1 | XP_031566491.1 | COUP transcription factor 2-like isoform X2 [Actinia tenebrosa] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000031754.1 | XP_031561177.1 | steroid hormone receptor ERR2-like [Actinia tenebrosa] | Q5RAM2 Estrogen-related receptor gamma OS=Pongo abelii OX=9601 GN=E | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000031938.1 | XP_031548740.1 | nuclear receptor subfamily 2 group E member 1-like [Actinia tenebrosa] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000033537.1 | XP_020893091.1 | photoreceptor-specific nuclear receptor [Exaiptasia diaphana] | Q9QXZ7 Photoreceptor-specific nuclear receptor OS=Mus musculus OX=1 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000037071.1 | XP_031551854.1 | retinoic acid receptor RXR-alpha-B-like [Actinia tenebrosa] | P19793 Retinoic acid receptor RXR-alpha OS=Homo sapiens OX=9606 GN= | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000037079.1 | XP_031551854.1 | retinoic acid receptor RXR-alpha-B-like [Actinia tenebrosa] | Q90415 Retinoic acid receptor RXR-alpha-B OS=Danio rerio OX=7955 GN | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000039417.1 | XP_031558220.1 | nuclear receptor subfamily 2 group F member 5-like [Actinia tenebrosa] | Q06726 Nuclear receptor subfamily 2 group F member 5 OS=Danio rerio | JBrowse |
