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This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000006085.1 | XP_031563529.1 | RNA-binding motif protein, X chromosome-like [Actinia tenebrosa] | O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000008694.1 | XP_031563538.1 | glycine-rich RNA-binding protein 2-like isoform X2 [Actinia tenebrosa] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000008702.1 | XP_031563538.1 | glycine-rich RNA-binding protein 2-like isoform X2 [Actinia tenebrosa] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000008704.1 | XP_031563538.1 | glycine-rich RNA-binding protein 2-like isoform X2 [Actinia tenebrosa] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000009393.1 | XP_031563533.1 | glycine-rich RNA-binding protein 10-like [Actinia tenebrosa] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000009398.1 | XP_031563533.1 | glycine-rich RNA-binding protein 10-like [Actinia tenebrosa] | – | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000023222.1 | XP_031549479.1 | SRA stem-loop-interacting RNA-binding protein, mitochondrial-like [Actinia tenebrosa] | Q08935 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylve | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000023248.1 | XP_031549479.1 | SRA stem-loop-interacting RNA-binding protein, mitochondrial-like [Actinia tenebrosa] | Q08935 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylve | JBrowse |
