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This orthogroup contains 295 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 295 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR17204 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED | 191 / 295 | 64.8% | 79.9% of 239 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 204 / 295 | 69.2% | 97.1% of 210 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 226 / 295 | 76.6% | 93.0% of 243 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 215 / 295 | 72.9% | 88.5% of 243 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 207 / 295 | 70.2% | 85.2% of 243 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 205 / 295 | 69.5% | 84.4% of 243 | ≥50% support |
| KEGG | K22611 | SART3, TIP110 — Chromosome and associated proteins | 169 / 295 | 57.3% | 94.4% of 179 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000037246.1 | XP_031571571.1 | squamous cell carcinoma antigen recognized by T-cells 3-like [Actinia tenebrosa] | Q15020 Spliceosome associated factor 3, U4/U6 recycling protein OS= | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000037254.1 | KXJ09061.1 | Squamous cell carcinoma antigen recognized by T-cells 3 [Exaiptasia diaphana] | Q15020 Spliceosome associated factor 3, U4/U6 recycling protein OS= | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000037268.1 | XP_031571571.1 | squamous cell carcinoma antigen recognized by T-cells 3-like [Actinia tenebrosa] | Q15020 Spliceosome associated factor 3, U4/U6 recycling protein OS= | JBrowse |
