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This orthogroup contains 292 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 292 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00587 | tRNA-synt_2b — tRNA synthetase class II core domain (G, H, P, S and T) | 237 / 292 | 81.2% | 94.1% of 252 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 257 / 292 | 88.0% | 100.0% of 257 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 255 / 292 | 87.3% | 99.2% of 257 | ≥80% support |
| GO | GO:0004828 Molecular Function | serine-tRNA ligase activity | 253 / 292 | 86.6% | 98.4% of 257 | ≥80% support |
| GO | GO:0006434 Biological Process | seryl-tRNA aminoacylation | 253 / 292 | 86.6% | 98.4% of 257 | ≥80% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 237 / 292 | 81.2% | 92.2% of 257 | ≥80% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 237 / 292 | 81.2% | 92.2% of 257 | ≥80% support |
| PANTHER | PTHR11778 | SERYL-TRNA SYNTHETASE | 208 / 292 | 71.2% | 80.9% of 257 | ≥50% support |
| Pfam | PF02403 | Seryl_tRNA_N — Seryl-tRNA synthetase N-terminal domain | 217 / 292 | 74.3% | 86.1% of 252 | ≥50% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 207 / 292 | 70.9% | 80.5% of 257 | ≥50% support |
| GO | GO:0005829 Cellular Component | cytosol | 206 / 292 | 70.6% | 80.2% of 257 | ≥50% support |
| KEGG | K01875 | SARS, serS — Transfer RNA biogenesis | 193 / 292 | 66.1% | 98.5% of 196 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000003555.1 | XP_031564993.1 | serine--tRNA ligase, cytoplasmic-like [Actinia tenebrosa] | Q6P799 Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=101 | JBrowse |
