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This orthogroup contains 278 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 278 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45936 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE | 232 / 278 | 83.5% | 100.0% of 232 | ≥80% support |
| Pfam | PF01207 | Dus | 224 / 278 | 80.6% | 92.6% of 242 | ≥80% support |
| GO | GO:0002943 Biological Process | tRNA dihydrouridine synthesis | 232 / 278 | 83.5% | 95.5% of 243 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 232 / 278 | 83.5% | 95.5% of 243 | ≥80% support |
| GO | GO:0017150 Molecular Function | tRNA dihydrouridine synthase activity | 232 / 278 | 83.5% | 95.5% of 243 | ≥80% support |
| Pfam | PF00035 | dsrm — Double-stranded RNA binding motif | 158 / 278 | 56.8% | 65.3% of 242 | ≥50% support |
| GO | GO:0008033 Biological Process | tRNA processing | 193 / 278 | 69.4% | 79.4% of 243 | ≥50% support |
| GO | GO:0050660 Molecular Function | flavin adenine dinucleotide binding | 193 / 278 | 69.4% | 79.4% of 243 | ≥50% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 178 / 278 | 64.0% | 73.3% of 243 | ≥50% support |
| KEGG | K05543 | DUS2 — Transfer RNA biogenesis | 197 / 278 | 70.9% | 98.5% of 200 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000014478.1 | XP_031565390.1 | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Actinia tenebrosa] | Q9D7B1 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus muscu | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000014484.1 | XP_031565390.1 | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Actinia tenebrosa] | Q9D7B1 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus muscu | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000014491.1 | XP_031565390.1 | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Actinia tenebrosa] | Q9D7B1 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus muscu | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000014502.1 | XP_031565390.1 | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Actinia tenebrosa] | Q9D7B1 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus muscu | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000014514.1 | XP_031565390.1 | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Actinia tenebrosa] | Q9D7B1 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus muscu | JBrowse |
