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Support counts the member genes carrying the term. % of genes is that count over all 262 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11142 | PSEUDOURIDYLATE SYNTHASE | 219 / 262 | 83.6% | 100.0% of 219 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 231 / 262 | 88.2% | 100.0% of 231 | ≥80% support |
| GO | GO:0009982 Molecular Function | pseudouridine synthase activity | 231 / 262 | 88.2% | 100.0% of 231 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 226 / 262 | 86.3% | 97.8% of 231 | ≥80% support |
| GO | GO:0009451 Biological Process | RNA modification | 226 / 262 | 86.3% | 97.8% of 231 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 219 / 262 | 83.6% | 94.8% of 231 | ≥80% support |
| GO | GO:0031119 Biological Process | tRNA pseudouridine synthesis | 219 / 262 | 83.6% | 94.8% of 231 | ≥80% support |
| GO | GO:1990481 Biological Process | mRNA pseudouridine synthesis | 219 / 262 | 83.6% | 94.8% of 231 | ≥80% support |
| Pfam | PF01416 | PseudoU_synth_1 — tRNA pseudouridine synthase | 167 / 262 | 63.7% | 98.8% of 169 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000029749.1 | XP_031570199.1 | tRNA pseudouridine synthase A-like [Actinia tenebrosa] | Q4KM92 Pseudouridylate synthase 1 homolog OS=Rattus norvegicus OX=1 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000029758.1 | XP_031570199.1 | tRNA pseudouridine synthase A-like [Actinia tenebrosa] | Q4KM92 Pseudouridylate synthase 1 homolog OS=Rattus norvegicus OX=1 | JBrowse |
