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Support counts the member genes carrying the term. % of genes is that count over all 173 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00658 | PABP — Poly-adenylate binding protein, unique domain | 156 / 173 | 90.2% | 100.0% of 156 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 157 / 173 | 90.8% | 100.0% of 157 | ≥80% support |
| PANTHER | PTHR46276 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | 138 / 173 | 79.8% | 99.3% of 139 | ≥50% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 138 / 173 | 79.8% | 87.9% of 157 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 138 / 173 | 79.8% | 87.9% of 157 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 138 / 173 | 79.8% | 87.9% of 157 | ≥50% support |
| GO | GO:0034450 Molecular Function | ubiquitin-ubiquitin ligase activity | 138 / 173 | 79.8% | 87.9% of 157 | ≥50% support |
| GO | GO:0090263 Biological Process | positive regulation of canonical Wnt signaling pathway | 138 / 173 | 79.8% | 87.9% of 157 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Anthopleura xanthogrammica | ENSOJPP00000012900.1 | XP_031562407.1 | tripartite motif-containing protein 3-like isoform X1 [Actinia tenebrosa] | P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN= | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000020252.1 | XP_031558605.1 | uncharacterized protein LOC116295046 isoform X1 [Actinia tenebrosa] | Q9LT82 Maternally expressed PAB C-terminal protein OS=Arabidopsis t | JBrowse |
