← Back to the gene family browser
This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Blastomussa wellsi | BRAKERLUSP00000003490.1 | XP_020632349.1 | glycine-rich RNA-binding protein 1-like [Orbicella faveolata] | Q43349 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thali | JBrowse |
| Blastomussa wellsi | BRAKERLUSP00000004452.1 | XP_022798572.1 | RNA-binding motif protein, X chromosome-like isoform X3 [Stylophora pistillata] | O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 | JBrowse |
| Blastomussa wellsi | BRAKERLUSP00000022917.1 | CAH3183130.1 | unnamed protein product [Porites evermanni] | – | JBrowse |
| Blastomussa wellsi | g19786.t1.1 | none | – | JBrowse | |
| Blastomussa wellsi | g19791.t1.1 | none | – | JBrowse | |
| Blastomussa wellsi | g7783.t1.1 | none | – | JBrowse |
